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  • Negative cofitness for GFF2665 from Sphingobium sp. HT1-2

    tRNA pseudouridine(38-40) synthase (EC 5.4.99.12)
    SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
    KEGG: tRNA pseudouridine synthase A

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF724 hypothetical protein -0.80
    2 GFF51 hypothetical protein -0.74
    3 GFF2477 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) -0.72
    4 GFF413 Outer membrane protein A precursor -0.70
    5 GFF4152 Pyridoxal phosphate-containing protein YggS -0.70
    6 GFF2647 HPr kinase -0.70
    7 GFF1240 dioxygenase, TauD/TfdA family -0.68
    8 GFF1840 TonB-dependent receptor -0.68
    9 GFF3705 Flagellar hook-associated protein FlgK -0.67
    10 GFF3956 hypothetical protein -0.67
    11 GFF818 Phosphoserine aminotransferase (EC 2.6.1.52) -0.66
    12 GFF3401 L-lactate dehydrogenase (EC 1.1.1.27) -0.66
    13 GFF4190 [Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme -0.66
    14 GFF2721 CzcABC family efflux RND transporter, membrane fusion protein -0.66
    15 GFF2638 Carboxypeptidase-related protein -0.65
    16 GFF2886 FIG033680: Hypothetical protein -0.65
    17 GFF828 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) -0.65
    18 GFF2274 hypothetical protein -0.64
    19 GFF2690 CzcABC family efflux RND transporter, membrane fusion protein -0.64
    20 GFF209 Uncharacterized protein CC_3059 -0.64

    Or look for positive cofitness