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  • Negative cofitness for GFF2628 from Sphingobium sp. HT1-2

    3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
    SEED: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
    KEGG: 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2767 Transcriptional regulator, AcrR family -0.85
    2 GFF967 Nucleoside-diphosphate-sugar epimerases -0.84
    3 GFF4227 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) -0.82
    4 GFF4171 Phosphoenolpyruvate synthase regulatory protein -0.80
    5 GFF1520 Protein containing domains DUF404, DUF407 -0.79
    6 GFF317 tRNA t(6)A37-methylthiotransferase (EC 2.8.4.5) -0.78
    7 GFF626 Efflux ABC transporter, permease/ATP-binding protein -0.78
    8 GFF3013 Penicillin amidase family protein -0.77
    9 GFF5253 hypothetical protein -0.77
    10 GFF3480 ATP-dependent RNA helicase Atu1833 -0.77
    11 GFF3820 RNase adapter protein RapZ -0.77
    12 GFF4438 Plasmid replication protein RepA -0.77
    13 GFF5247 hypothetical protein -0.76
    14 GFF646 Aspartate aminotransferase (EC 2.6.1.1) -0.76
    15 GFF5254 Mobilization protein -0.76
    16 GFF1747 hypothetical protein -0.76
    17 GFF3767 hypothetical protein -0.75
    18 GFF2792 hypothetical protein -0.75
    19 GFF1744 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) -0.75
    20 GFF4100 hypothetical protein -0.74

    Or look for positive cofitness