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  • Negative cofitness for GFF2600 from Variovorax sp. SCN45

    Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
    SEED: Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
    KEGG: shikimate dehydrogenase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3186 FIG01046500: hypothetical protein -0.55
    2 GFF5716 Flagellar basal-body rod protein FlgC -0.51
    3 GFF3908 FIG00582414: hypothetical protein -0.51
    4 GFF4246 FIG00464377: hypothetical protein -0.51
    5 GFF7101 hypothetical protein -0.48
    6 GFF4737 Nitrate ABC transporter, substrate-binding protein -0.47
    7 GFF5664 hypothetical protein -0.47
    8 GFF1010 hypothetical protein -0.47
    9 GFF7100 similar to protocatechuate 4,5-dioxygenase beta chain -0.46
    10 GFF6408 Urocanate hydratase (EC 4.2.1.49) -0.46
    11 GFF3672 no description -0.46
    12 GFF2886 Metallo-beta-lactamase superfamily protein PA0057 -0.45
    13 GFF954 hypothetical protein -0.45
    14 GFF3555 Mg-chelatase subunit ChlD -0.45
    15 GFF5424 Membrane protein TerC, possibly involved in tellurium resistance -0.45
    16 GFF578 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) -0.44
    17 GFF6810 no description -0.44
    18 GFF7342 Oxidoreductase -0.44
    19 GFF4401 no description -0.44
    20 GFF5408 Protein serine/threonine phosphatase PrpC, regulation of stationary phase -0.44

    Or look for positive cofitness