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  • Negative cofitness for GFF2510 from Variovorax sp. SCN45

    Type IV fimbrial assembly, ATPase PilB
    SEED: Type IV fimbrial assembly, ATPase PilB
    KEGG: type IV pilus assembly protein PilB

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3917 Ferrous iron transporter FeoB -0.79
    2 GFF531 hypothetical protein -0.72
    3 GFF5288 Uncharacterized protein PA4513 -0.72
    4 GFF3893 hypothetical protein -0.71
    5 GFF5002 ABC-type branched-chain amino acid transport systems, periplasmic component -0.70
    6 GFF3261 FIG003003: hypothetical protein -0.69
    7 GFF2505 hypothetical protein -0.69
    8 GFF2354 FIG00555615: hypothetical protein -0.68
    9 GFF2152 twitching motility protein PilH -0.68
    10 GFF256 Twitching motility protein PilT -0.67
    11 GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) -0.67
    12 GFF3931 Protein sirB1 -0.66
    13 GFF5429 Iron(III) dicitrate transport protein FecA -0.66
    14 GFF2506 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) -0.66
    15 GFF5408 Protein serine/threonine phosphatase PrpC, regulation of stationary phase -0.65
    16 GFF3920 FIG00467295: hypothetical protein -0.64
    17 GFF5860 no description -0.64
    18 GFF6698 ClpXP protease specificity-enhancing factor SspB -0.62
    19 GFF5341 Efflux ABC transporter, permease protein -0.61
    20 GFF2501 O-antigen acetylase -0.61

    Or look for positive cofitness