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  • Negative cofitness for GFF2501 from Variovorax sp. SCN45

    O-antigen acetylase
    SEED: O-antigen acetylase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5128 hypothetical protein -0.71
    2 GFF5417 hypothetical protein -0.64
    3 GFF6290 RNA polymerase sigma-54 factor RpoN -0.64
    4 GFF5319 Type IV pilus biogenesis protein PilM -0.64
    5 GFF5414 hypothetical protein -0.64
    6 GFF5418 Type IV fimbrial biogenesis protein PilY1 -0.64
    7 GFF5321 Type IV pilus biogenesis protein PilO -0.63
    8 GFF5419 Type IV pilus biogenesis protein PilE -0.63
    9 GFF340 Cardiolipin synthase, bacterial type ClsA -0.63
    10 GFF6075 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB -0.63
    11 GFF993 Type IV pilus biogenesis protein PilF -0.63
    12 GFF5416 Type IV fimbrial biogenesis protein PilW -0.63
    13 GFF33 Type IV pilus biogenesis protein PilZ -0.63
    14 GFF2519 FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) -0.63
    15 GFF3826 Response regulator receiver:LytTr DNA-binding region -0.63
    16 GFF2509 Type IV fimbrial assembly protein PilC -0.62
    17 GFF5322 Type IV pilus biogenesis protein PilP -0.62
    18 GFF5323 Type IV pilus biogenesis protein PilQ -0.62
    19 GFF3886 Putative transmembrane protein -0.62
    20 GFF3068 FIG00538108: hypothetical protein -0.62

    Or look for positive cofitness