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  • Negative cofitness for PS417_12740 from Pseudomonas simiae WCS417

    secretion protein HlyD
    SEED: Probable Co/Zn/Cd efflux system membrane fusion protein
    KEGG: putative multidrug efflux transporter MdtA

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_24605 thiamine-phosphate pyrophosphorylase -0.31
    2 PS417_03070 LuxR family transcriptional regulator -0.28
    3 PS417_13425 cupin -0.26
    4 PS417_24600 hydrogenase -0.23
    5 PS417_02355 thiamine biosynthesis protein ThiC -0.23
    6 PS417_21050 serine acetyltransferase -0.22
    7 PS417_22610 pilus assembly protein PilZ -0.22
    8 PS417_20955 secretion protein -0.22
    9 PS417_17045 hypothetical protein -0.22
    10 PS417_12475 hypothetical protein -0.22
    11 PS417_19145 membrane protein -0.22
    12 PS417_24450 membrane protein -0.21
    13 PS417_06365 RNA polymerase sigma factor -0.21
    14 PS417_09900 hypothetical protein -0.21
    15 PS417_26110 ABC transporter permease -0.20
    16 PS417_03055 histidine kinase -0.20
    17 PS417_12610 RNA polymerase sigma factor -0.19
    18 PS417_12530 LysR family transcriptional regulator -0.19
    19 PS417_24915 hypothetical protein -0.19
    20 PS417_23740 LysR family transcriptional regulator -0.19

    Or look for positive cofitness