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  • Negative cofitness for GFF2488 from Variovorax sp. SCN45

    Two-component transcriptional response regulator, LuxR family
    SEED: Two-component response regulator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF552 Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8) -0.63
    2 GFF1433 hypothetical protein -0.56
    3 GFF6822 Peptidase C14, caspase catalytic subunit p20 -0.55
    4 GFF3327 RidA/YER057c/UK114 superfamily, group 1 -0.54
    5 GFF5017 Translation initiation factor SUI1-related protein -0.54
    6 GFF284 putative 2-pyrone-4,6-dicarboxylic acid hydrolase -0.52
    7 GFF4799 hypothetical protein -0.51
    8 GFF768 Trehalose synthase (EC 5.4.99.16) -0.51
    9 GFF6010 MmgE/PrpD family protein -0.50
    10 GFF2952 Arsenic resistance protein ArsH -0.49
    11 GFF1944 hypothetical protein -0.49
    12 GFF7230 Threonine dehydrogenase and related Zn-dependent dehydrogenases -0.48
    13 GFF175 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.48
    14 GFF647 Two-component system response regulator QseB -0.48
    15 GFF4615 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase -0.46
    16 GFF1138 Transcriptional regulator, AcrR family -0.46
    17 GFF2625 hypothetical protein -0.46
    18 GFF287 hypothetical protein -0.46
    19 GFF3006 hypothetical protein -0.46
    20 GFF5683 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.45

    Or look for positive cofitness