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  • Negative cofitness for PS417_12555 from Pseudomonas simiae WCS417

    phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data)
    Original annotation: bifunctional glyoxylate/hydroxypyruvate reductase B
    SEED: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43)
    KEGG: phosphogluconate 2-dehydrogenase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_07755 hypothetical protein -0.29
    2 PS417_14485 malto-oligosyltrehalose trehalohydrolase -0.23
    3 PS417_27440 delta-aminolevulinic acid dehydratase -0.22
    4 PS417_13650 LacI family transcriptional regulator -0.21
    5 PS417_07445 peptidase S9 -0.21
    6 PS417_00575 LysR family transcriptional regulator -0.21
    7 PS417_16770 pyridine nucleotide-disulfide oxidoreductase -0.20
    8 PS417_19775 chemotaxis protein CheY -0.20
    9 PS417_15640 DNA methylase -0.19
    10 PS417_21945 RNA polymerase subunit sigma-24 -0.19
    11 PS417_12995 MFS transporter permease -0.19
    12 PS417_10720 chemotaxis protein CheY -0.19
    13 PS417_16295 hypothetical protein -0.19
    14 PS417_21680 succinylglutamate desuccinylase -0.18
    15 PS417_08785 urea transporter -0.18
    16 PS417_12835 GNAT family acetyltransferase -0.18
    17 PS417_12550 chemotaxis protein -0.18
    18 PS417_00795 lipoprotein -0.18
    19 PS417_07290 aldehyde dehydrogenase -0.18
    20 PS417_03055 histidine kinase -0.18

    Or look for positive cofitness