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  • Negative cofitness for GFF2453 from Variovorax sp. SCN45

    NAD-dependent dihydropyrimidine dehydrogenase subunit PreT (EC 1.3.1.1)
    SEED: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
    KEGG: glutamate synthase (NADPH/NADH) small chain

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2267 Integral membrane protein -0.60
    2 GFF7304 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) -0.60
    3 GFF153 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) -0.58
    4 GFF5572 FIG00984604: hypothetical protein -0.57
    5 GFF4966 no description -0.55
    6 GFF494 RND efflux system, membrane fusion protein -0.54
    7 GFF3335 no description -0.53
    8 GFF4544 RNA polymerase sigma factor RpoE -0.53
    9 GFF549 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) -0.52
    10 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) -0.51
    11 GFF3079 hypothetical protein -0.51
    12 GFF1178 hypothetical protein -0.51
    13 GFF156 Glycosyl transferase, group 2 family -0.51
    14 GFF375 hypothetical protein -0.50
    15 GFF5438 Glutathione peroxidase (EC 1.11.1.9) -0.50
    16 GFF2528 ABC transporter, ATP-binding protein PA3838 -0.49
    17 GFF3166 Transcriptional regulator, IclR family -0.49
    18 GFF1349 Thioesterase -0.49
    19 GFF1526 putative transmembrane sensor -0.49
    20 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 -0.48

    Or look for positive cofitness