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  • Negative cofitness for PS417_12455 from Pseudomonas simiae WCS417

    hydrolase
    SEED: HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217)

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_11930 hypothetical protein -0.22
    2 PS417_18605 LysR family transcriptional regulator -0.20
    3 PS417_25045 hypothetical protein -0.19
    4 PS417_05255 hypothetical protein -0.19
    5 PS417_06665 LysR family transcriptional regulator -0.18
    6 PS417_19960 membrane protein -0.18
    7 PS417_25675 membrane protein -0.18
    8 PS417_02985 diguanylate cyclase -0.17
    9 PS417_19425 allantoicase -0.17
    10 PS417_10575 DNA alkylation repair protein -0.17
    11 PS417_18435 hypothetical protein -0.16
    12 PS417_19520 transcriptional regulator -0.16
    13 PS417_06730 3-carboxy-cis,cis-muconate cycloisomerase -0.16
    14 PS417_09470 hypothetical protein -0.16
    15 PS417_13405 helicase UvrD -0.16
    16 PS417_00350 methionine ABC transporter substrate-binding protein -0.16
    17 PS417_09305 hypothetical protein -0.16
    18 PS417_16375 2-hydroxyacid dehydrogenase -0.16
    19 PS417_16520 cold-shock protein -0.16
    20 PS417_17305 hypothetical protein -0.16

    Or look for positive cofitness