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  • Negative cofitness for GFF2425 from Sphingobium sp. HT1-2

    Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage
    SEED: Membrane-associated zinc metalloprotease
    KEGG: regulator of sigma E protease

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4314 IncF plasmid conjugative transfer pilus assembly protein TraK -0.82
    2 GFF266 hypothetical protein -0.79
    3 GFF945 Protein containing domains DUF404, DUF407, DUF403 -0.79
    4 GFF3497 hypothetical protein -0.78
    5 GFF4924 dioxygenase, TauD/TfdA family -0.78
    6 GFF1925 Predicted D-glucarate or D-galactorate regulator, GntR family -0.78
    7 GFF993 Tol biopolymer transport system, TolR protein -0.78
    8 GFF3227 hypothetical protein -0.77
    9 GFF4353 Nitrite-sensitive transcriptional repressor NsrR -0.76
    10 GFF2197 hypothetical protein -0.75
    11 GFF801 Phenazine biosynthesis protein PhzF like -0.75
    12 GFF2188 hypothetical protein -0.74
    13 GFF1775 Gene Transfer Agent (GTA) ORFG08 -0.74
    14 GFF5359 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) -0.74
    15 GFF285 Mobile element protein -0.74
    16 GFF4216 hypothetical protein -0.73
    17 GFF2944 hypothetical protein -0.72
    18 GFF935 hypothetical protein -0.72
    19 GFF5324 hypothetical protein -0.72
    20 GFF2523 hypothetical protein -0.71

    Or look for positive cofitness