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  • Negative cofitness for GFF2404 from Variovorax sp. SCN45

    Hypothetical protein with Rieske (2Fe-2S) region
    SEED: Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
    KEGG: vanillate monooxygenase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1224 Transcriptional regulator, LysR family -0.58
    2 GFF1175 Two-component system response regulator QseB -0.54
    3 GFF710 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) -0.53
    4 GFF2708 no description -0.52
    5 GFF7073 no description -0.52
    6 GFF923 Chromosome partition protein smc -0.52
    7 GFF2229 Pca regulon regulatory protein PcaR -0.51
    8 GFF4713 Uncharacterized protein YhiN -0.51
    9 GFF5532 Putative oxidoreductase -0.51
    10 GFF5032 ABC-type spermidine/putrescine transport system, permease component I -0.51
    11 GFF7357 Phenylacetate ABC transporter, ATP-binding protein 1 -0.49
    12 GFF6330 BUG/TctC family periplasmic protein -0.49
    13 GFF2715 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) -0.48
    14 GFF3059 Transcriptional regulator, LysR family -0.48
    15 GFF1775 no description -0.48
    16 GFF6831 hypothetical protein -0.47
    17 GFF1964 Histone acetyltransferase HPA2 and related acetyltransferases -0.47
    18 GFF2033 no description -0.46
    19 GFF810 Glutathione S-transferase (EC 2.5.1.18) -0.46
    20 GFF6421 ATPase, AAA family -0.46

    Or look for positive cofitness