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  • Negative cofitness for GFF2395 from Variovorax sp. SCN45

    D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-)
    SEED: Type III PLP / low-specificity D-threonine aldolase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF469 hypothetical protein -0.54
    2 GFF27 4-hydroxybenzoyl-CoA thioesterase family active site -0.53
    3 GFF2992 BUG/TctC family periplasmic protein -0.53
    4 GFF264 Efflux transport system, outer membrane factor (OMF) lipoprotein -0.51
    5 GFF1566 no description -0.51
    6 GFF6555 no description -0.51
    7 GFF6439 Transcriptional regulator, LysR family -0.49
    8 GFF4614 Transcriptional regulator, AraC family -0.48
    9 GFF7003 Flagellar basal-body rod protein FlgF -0.47
    10 GFF1301 Peptide deformylase (EC 3.5.1.88) -0.47
    11 GFF141 Transcriptional regulator, AraC family -0.46
    12 GFF6239 Catalase KatE-intracellular protease (EC 1.11.1.6) -0.45
    13 GFF6001 Purine nucleoside permease -0.45
    14 GFF5217 Ferric iron ABC transporter, iron-binding protein -0.45
    15 GFF1171 Transcriptional regulator, AraC family -0.45
    16 GFF6644 DNA-binding transcriptional regulator, MocR family / aminotransferase domain -0.45
    17 GFF4218 no description -0.44
    18 GFF1184 UPF0060 membrane protein YnfA -0.44
    19 GFF420 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) -0.44
    20 GFF2446 FIG00956403: hypothetical protein -0.44

    Or look for positive cofitness