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  • Negative cofitness for PS417_12170 from Pseudomonas simiae WCS417

    ABC transporter permease
    SEED: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
    KEGG: microcin C transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_06365 RNA polymerase sigma factor -0.34
    2 PS417_17515 GfdT protein -0.31
    3 PS417_14945 beta-lactamase -0.30
    4 PS417_02145 potassium transporter KefA -0.30
    5 PS417_14965 transcriptional regulator -0.28
    6 PS417_21050 serine acetyltransferase -0.28
    7 PS417_20955 secretion protein -0.28
    8 PS417_19540 hypothetical protein -0.28
    9 PS417_27605 hypothetical protein -0.27
    10 PS417_21040 sulfurylase -0.27
    11 PS417_13425 cupin -0.27
    12 PS417_12610 RNA polymerase sigma factor -0.27
    13 PS417_21375 ADP-ribosylglycohydrolase -0.27
    14 PS417_10550 DNA topoisomerase III -0.27
    15 PS417_21045 cysteine synthase -0.27
    16 PS417_14960 ATPase -0.27
    17 PS417_24605 thiamine-phosphate pyrophosphorylase -0.26
    18 PS417_03910 pilus assembly protein -0.26
    19 PS417_03070 LuxR family transcriptional regulator -0.26
    20 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase -0.26

    Or look for positive cofitness