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  • Negative cofitness for PS417_12135 from Pseudomonas simiae WCS417

    peptidylprolyl isomerase
    SEED: Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8)
    KEGG: peptidyl-prolyl cis-trans isomerase C

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_23155 pilus assembly protein PilW -0.36
    2 PS417_27605 hypothetical protein -0.28
    3 PS417_27610 hypothetical protein -0.28
    4 PS417_11900 conjugal transfer protein TraR -0.28
    5 PS417_01165 transcription accessory protein -0.26
    6 PS417_25635 biotin--protein ligase -0.25
    7 PS417_12595 transcriptional regulator -0.25
    8 PS417_13765 histidine kinase -0.23
    9 PS417_26525 DEAD/DEAH box helicase -0.23
    10 PS417_04000 hypothetical protein -0.23
    11 PS417_23135 GTP-binding protein -0.21
    12 PS417_24890 transferase -0.21
    13 PS417_03985 flavodoxin -0.21
    14 PS417_06770 multidrug transporter -0.21
    15 PS417_07625 helicase -0.21
    16 PS417_04590 methyltransferase -0.21
    17 PS417_08655 pseudouridine synthase -0.20
    18 PS417_17190 MarR family transcriptional regulator -0.20
    19 PS417_21085 GntR family transcriptional regulator -0.20
    20 PS417_02495 GTPase HflX -0.20

    Or look for positive cofitness