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  • Negative cofitness for PS417_12055 from Pseudomonas simiae WCS417

    xylitol ABC transporter, substrate-binding component (from data)
    Original annotation: sugar ABC transporter substrate-binding protein
    SEED: Inositol transport system sugar-binding protein
    KEGG: ribose transport system substrate-binding protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_13965 acetoin utilization protein -0.28
    2 PS417_17715 actin -0.27
    3 PS417_07775 hypothetical protein -0.27
    4 PS417_19835 flagellar biosynthesis protein FliS -0.26
    5 PS417_20685 CAAX protease -0.25
    6 PS417_19690 histidine kinase -0.25
    7 PS417_18000 hypothetical protein -0.24
    8 PS417_19825 ATPase AAA -0.23
    9 PS417_19885 flagellar basal body rod protein FlgG -0.23
    10 PS417_25840 SpoVR family protein -0.23
    11 PS417_19695 flagellar biosynthesis sigma factor -0.23
    12 PS417_27615 ammonia channel protein -0.23
    13 PS417_19865 flagellar hook protein FlgK -0.22
    14 PS417_21555 flagellar hook protein FlgE -0.22
    15 PS417_19655 chemotaxis protein CheW -0.22
    16 PS417_21585 flagellar basal body P-ring biosynthesis protein FlgA -0.22
    17 PS417_06480 hypothetical protein -0.22
    18 PS417_15495 FAD-dependent oxidoreductase -0.22
    19 PS417_19860 flagellar hook protein FlgL -0.21
    20 PS417_08135 3-phosphoshikimate 1-carboxyvinyltransferase -0.21

    Or look for positive cofitness