• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PS417_12050 from Pseudomonas simiae WCS417

    short-chain dehydrogenase
    SEED: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)
    KEGG: 2-deoxy-D-gluconate 3-dehydrogenase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_07640 glyceraldehyde-3-phosphate dehydrogenase -0.22
    2 PS417_16570 isocitrate lyase -0.18
    3 PS417_16225 sugar ABC transporter permease -0.18
    4 PS417_01210 hypothetical protein -0.18
    5 PS417_13395 phosphoglucomutase -0.17
    6 PS417_09735 hypothetical protein -0.17
    7 PS417_17480 branched-chain amino acid ABC transporter substrate-binding protein -0.17
    8 PS417_15445 ABC transporter permease -0.17
    9 PS417_17485 membrane protein -0.17
    10 PS417_26645 chemotaxis protein -0.16
    11 PS417_06860 methyltransferase -0.16
    12 PS417_19355 glutaredoxin -0.16
    13 PS417_24170 cell division protein FtsK -0.16
    14 PS417_10205 hypothetical protein -0.15
    15 PS417_20325 hypothetical protein -0.15
    16 PS417_07890 hypothetical protein -0.15
    17 PS417_12730 glycosyltransferase -0.15
    18 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE -0.15
    19 PS417_08390 transcription elongation factor GreB -0.15
    20 PS417_21070 aconitate hydratase -0.15

    Or look for positive cofitness