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  • Negative cofitness for PS417_11995 from Pseudomonas simiae WCS417

    RNA polymerase sigma factor
    SEED: RNA polymerase sigma factor RpoE
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_15330 type VI secretion protein ImpA -0.24
    2 PS417_20135 hypothetical protein -0.23
    3 PS417_12635 alkanesulfonate monooxygenase -0.22
    4 PS417_07000 hypothetical protein -0.21
    5 PS417_06865 transporter -0.20
    6 PS417_24180 hypothetical protein -0.20
    7 PS417_08020 LysR family transcriptional regulator -0.20
    8 PS417_05395 glycosyl transferase family 51 -0.19
    9 PS417_22005 epimerase -0.19
    10 PS417_05595 ornithine carbamoyltransferase -0.18
    11 PS417_15260 protein phosphatase -0.17
    12 PS417_23700 aromatic amino acid transporter -0.17
    13 PS417_04700 RND transporter MFP subunit -0.17
    14 PS417_28200 hypothetical protein -0.17
    15 PS417_15625 lactate dehydrogenase -0.17
    16 PS417_06705 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) (from data) -0.16
    17 PS417_01995 hypothetical protein -0.16
    18 PS417_01415 glycosyl transferase family 1 -0.16
    19 PS417_02775 heat-shock protein -0.16
    20 PS417_24155 ATP-binding protein -0.16

    Or look for positive cofitness