• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PS417_11870 from Pseudomonas simiae WCS417

    3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) (from data)
    Original annotation: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
    SEED: Epi-inositol hydrolase (EC 3.7.1.-)
    KEGG: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_22965 DNA mismatch repair protein MutT -0.45
    2 PS417_10560 choline dehydrogenase -0.45
    3 PS417_22805 hypothetical protein -0.37
    4 PS417_10565 LysR family transcriptional regulator -0.34
    5 PS417_24680 murein transglycosylase -0.30
    6 PS417_19945 MarR family transcriptional regulator -0.26
    7 PS417_07565 hypothetical protein -0.25
    8 PS417_07160 glycine cleavage system protein R -0.22
    9 PS417_20975 protein kinase -0.22
    10 PS417_15955 secretion protein HylD -0.21
    11 PS417_25635 biotin--protein ligase -0.21
    12 PS417_08500 LysR family transcriptional regulator -0.20
    13 PS417_20980 uroporphyrin-III methyltransferase -0.20
    14 PS417_05755 tail protein -0.20
    15 PS417_24220 hypothetical protein -0.20
    16 PS417_03005 arginine decarboxylase -0.19
    17 PS417_06585 hypothetical protein -0.19
    18 PS417_08930 hypothetical protein -0.18
    19 PS417_26940 phosphonate ABC transporter permease -0.18
    20 PS417_05785 tail protein -0.18

    Or look for positive cofitness