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  • Negative cofitness for GFF2324 from Variovorax sp. SCN45

    Lactam utilization protein LamB
    SEED: Lactam utilization protein LamB
    KEGG: UPF0271 protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3174 Oxidoreductase, GMC family -0.54
    2 GFF2921 D-galactarate dehydratase (EC 4.2.1.42) -0.52
    3 GFF1357 no description -0.50
    4 GFF5475 Uncharacterized MFS-type transporter -0.50
    5 GFF7248 no description -0.49
    6 GFF4879 Transcriptional regulator, Xre family -0.49
    7 GFF4667 hypothetical protein -0.49
    8 GFF4376 UPF0380 proteins YafZ and homologs -0.49
    9 GFF3393 Benzoate ABC transporter, ATP-binding protein 2 -0.49
    10 GFF5221 Phosphonoacetaldehyde hydrolase (EC 3.11.1.1) -0.48
    11 GFF6811 hypothetical protein -0.48
    12 GFF7210 Hydroxymethylpyrimidine ABC transporter, transmembrane component -0.48
    13 GFF5763 Signal transduction histidine kinase CheA -0.48
    14 GFF3169 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.47
    15 GFF5534 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) -0.46
    16 GFF710 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) -0.46
    17 GFF879 BUG/TctC family periplasmic protein -0.46
    18 GFF1365 no description -0.45
    19 GFF6134 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.45
    20 GFF4111 ABC-type amino acid transport/signal transduction system, periplasmic component/domain -0.44

    Or look for positive cofitness