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  • Negative cofitness for PS417_11845 from Pseudomonas simiae WCS417

    RpiR family transcriptional regulator
    SEED: Predicted transcriptional regulator of the myo-inositol catabolic operon

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_26125 glutathione S-transferase -0.34
    2 PS417_01820 chemotaxis protein -0.32
    3 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein -0.30
    4 PS417_26875 histidine kinase -0.29
    5 PS417_26320 ABC transporter permease -0.29
    6 PS417_26345 choline dehydrogenase -0.28
    7 PS417_07160 glycine cleavage system protein R -0.28
    8 PS417_22250 pseudouridine synthase -0.25
    9 PS417_19635 lipid kinase -0.24
    10 PS417_12785 hypothetical protein -0.24
    11 PS417_01945 nuclease -0.24
    12 PS417_09620 lipopolysaccharide biosynthesis protein -0.24
    13 PS417_09615 glycosyl transferase family 1 -0.23
    14 PS417_19350 GTP cyclohydrolase -0.23
    15 PS417_05135 nucleoid-associated protein -0.23
    16 PS417_09585 acetyltransferase -0.22
    17 PS417_04550 hypothetical protein -0.22
    18 PS417_18805 hypothetical protein -0.22
    19 PS417_13865 bestrophin -0.22
    20 PS417_04545 hypothetical protein -0.21

    Or look for positive cofitness