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  • Negative cofitness for GFF2318 from Variovorax sp. SCN45

    Transcriptional regulator ArgP, LysR family
    SEED: Transcriptional regulator, LysR family
    KEGG: LysR family transcriptional regulator, chromosome initiation inhibitor

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1990 Transcriptional regulator, MerR family -0.54
    2 GFF4195 BUG/TctC family periplasmic protein -0.52
    3 GFF4873 no description -0.50
    4 GFF5474 no description -0.50
    5 GFF2437 hypothetical protein -0.50
    6 GFF881 Transcriptional regulator ligR, LysR family -0.50
    7 GFF5906 Nitrilase (EC 3.5.5.7) -0.49
    8 GFF101 Phosphate-binding DING protein (related to PstS) -0.48
    9 GFF2403 CHAP domain containing protein -0.48
    10 GFF4494 hypothetical protein -0.47
    11 GFF12 Two-component system sensor histidine kinase -0.46
    12 GFF3013 KEGG: type VI secretion system secreted protein Hcp -0.46
    13 GFF2189 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) -0.46
    14 GFF4106 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) -0.46
    15 GFF5743 Flagellar motor switch protein FliM -0.46
    16 GFF6927 Transcriptional regulator, ArsR family -0.46
    17 GFF6085 Transcriptional regulator, AcrR family -0.46
    18 GFF803 MutT/Nudix family protein -0.46
    19 GFF7006 Flagellar biosynthesis protein FliR -0.46
    20 GFF6454 Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit -0.45

    Or look for positive cofitness