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  • Negative cofitness for PS417_11705 from Pseudomonas simiae WCS417

    cyclic peptide transporter
    SEED: PvdE, pyoverdine ABC export system, fused ATPase and permease components
    KEGG: putative ATP-binding cassette transporter

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_19555 RNA polymerase sigma70 -0.36
    2 PS417_07910 hypothetical protein -0.32
    3 PS417_20595 hypothetical protein -0.31
    4 PS417_24175 hypothetical protein -0.29
    5 PS417_27995 type IV secretion protein Rhs -0.29
    6 PS417_19545 peptide synthase -0.28
    7 PS417_11450 AraC family transcriptional regulator -0.27
    8 PS417_18370 hypothetical protein -0.25
    9 PS417_01200 phosphoesterase -0.25
    10 PS417_03370 porin -0.24
    11 PS417_12800 alpha-amylase -0.24
    12 PS417_11445 enoyl-CoA hydratase -0.24
    13 PS417_04830 alginate biosynthesis protein -0.24
    14 PS417_20420 reverse transcriptase -0.23
    15 PS417_01600 peptidase M23 -0.23
    16 PS417_24155 ATP-binding protein -0.23
    17 PS417_16780 ABC transporter permease -0.23
    18 PS417_23110 2-isopropylmalate synthase -0.23
    19 PS417_06920 epimerase -0.23
    20 PS417_02000 glutamate synthase -0.23

    Or look for positive cofitness