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  • Negative cofitness for GFF2285 from Variovorax sp. SCN45

    Transcriptional regulator, RpiR family
    SEED: Transcriptional regulator, RpiR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6392 hypothetical protein -0.66
    2 GFF3906 Acyl-CoA dehydrogenase -0.61
    3 GFF5429 Iron(III) dicitrate transport protein FecA -0.61
    4 GFF493 RND efflux system, inner membrane transporter -0.59
    5 GFF2830 Uncharacterized protein CC_3061 -0.59
    6 GFF7162 DNA helicase II related protein -0.59
    7 GFF4801 DedA protein -0.59
    8 GFF492 no description -0.58
    9 GFF3935 RNA polymerase ECF-type sigma factor -0.58
    10 GFF6173 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B -0.58
    11 GFF5408 Protein serine/threonine phosphatase PrpC, regulation of stationary phase -0.57
    12 GFF5002 ABC-type branched-chain amino acid transport systems, periplasmic component -0.55
    13 GFF3912 Ferrous iron transport permease EfeU -0.55
    14 GFF2506 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) -0.55
    15 GFF6532 Phosphoglucomutase (EC 5.4.2.2) @ Phosphomannomutase (EC 5.4.2.8) -0.55
    16 GFF563 Type IV fimbrial biogenesis protein PilY1 -0.54
    17 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) -0.54
    18 GFF5855 T1SS secreted agglutinin RTX -0.53
    19 GFF4408 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type -0.53
    20 GFF456 Transcriptional regulator, AraC family -0.53

    Or look for positive cofitness