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  • Negative cofitness for GFF2280 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
    SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
    KEGG: branched-chain amino acid transport system substrate-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7261 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) -0.51
    2 GFF3014 KEGG: type VI secretion system protein ImpF -0.47
    3 GFF3953 Uncharacterized Nudix hydrolase NudL -0.47
    4 GFF723 RNA polymerase ECF-type sigma factor -0.47
    5 GFF4451 Permease of the drug/metabolite transporter (DMT) superfamily -0.46
    6 GFF1366 Uncharacterized MFS-type transporter -0.46
    7 GFF5775 Glucoamylase (EC 3.2.1.3) -0.46
    8 GFF6726 hypothetical protein -0.46
    9 GFF6808 Peroxiredoxin OsmC (EC 1.11.1.15) -0.45
    10 GFF1115 Putative transmembrane protein -0.44
    11 GFF2981 no description -0.44
    12 GFF4721 ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) -0.44
    13 GFF5959 Putative amidase R03093 -0.44
    14 GFF6262 Transcriptional regulator PhnF -0.44
    15 GFF5636 Molybdenum ABC transporter, substrate-binding protein ModA -0.44
    16 GFF7131 no description -0.43
    17 GFF1886 Elongation factor G-like protein TM_1651 -0.43
    18 GFF3757 hypothetical protein -0.43
    19 GFF7127 Mobile element protein -0.43
    20 GFF2422 Polysaccharide deacetylase -0.43

    Or look for positive cofitness