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  • Negative cofitness for PS417_11600 from Pseudomonas simiae WCS417

    urea ABC transporter permease
    SEED: Urea ABC transporter, permease protein UrtB
    KEGG: branched-chain amino acid transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_03060 pilus assembly protein TadE -0.23
    2 PS417_03105 secretin -0.21
    3 PS417_13425 cupin -0.21
    4 PS417_12020 peptidase -0.21
    5 PS417_18225 phenol degradation protein meta -0.20
    6 PS417_16160 ABC transporter substrate-binding protein -0.20
    7 PS417_06970 LysR family transcriptional regulator -0.20
    8 PS417_14495 maltooligosyl trehalose synthase -0.19
    9 PS417_08985 histidine kinase -0.19
    10 PS417_05795 lysozyme -0.19
    11 PS417_26285 3-hydroxybutyryl-CoA dehydrogenase -0.19
    12 PS417_17625 ornithine monooxygenase -0.19
    13 PS417_20425 hypothetical protein -0.18
    14 PS417_20420 reverse transcriptase -0.18
    15 PS417_19235 GNAT family acetyltransferase -0.18
    16 PS417_04995 glutathione S-transferase -0.18
    17 PS417_19560 amino acid ABC transporter substrate-binding protein -0.18
    18 PS417_06080 hypothetical protein -0.18
    19 PS417_12550 chemotaxis protein -0.18
    20 PS417_08060 proline iminopeptidase -0.18

    Or look for positive cofitness