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  • Negative cofitness for GFF227 from Variovorax sp. SCN45

    ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines)
    SEED: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
    KEGG: microcin C transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3758 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) -0.79
    2 GFF6294 Cell division protein -0.78
    3 GFF6036 DNA translocase FtsK -0.77
    4 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) -0.76
    5 GFF239 DNA polymerase III chi subunit (EC 2.7.7.7) -0.76
    6 GFF2649 putative autotransporter protein -0.75
    7 GFF2836 MotA/TolQ/ExbB proton channel family protein -0.72
    8 GFF1119 Ribonuclease HI (EC 3.1.26.4) -0.72
    9 GFF6392 hypothetical protein -0.71
    10 GFF2504 Cell division protein ZapD -0.71
    11 GFF2835 putative TonB-dependent receptor -0.70
    12 GFF489 ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) -0.70
    13 GFF2738 hypothetical protein -0.69
    14 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) -0.69
    15 GFF7375 Arginine:pyruvate transaminase -0.69
    16 GFF4396 Mobile element protein -0.69
    17 GFF6390 GtrA-like protein -0.68
    18 GFF7373 CaiB/BaiF family protein -0.67
    19 GFF312 FIG021862: membrane protein, exporter -0.65
    20 GFF7323 Transcriptional response regulatory protein GlrR -0.64

    Or look for positive cofitness