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  • Negative cofitness for PS417_11550 from Pseudomonas simiae WCS417

    FAD-binding oxidoreductase
    SEED: Sarcosine oxidase beta subunit (EC 1.5.3.1)
    KEGG: sarcosine oxidase, subunit beta

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_02985 diguanylate cyclase -0.24
    2 PS417_09960 hypothetical protein -0.23
    3 PS417_11855 Myo-inosose-2 dehydratase (EC 4.2.1.44) (from data) -0.23
    4 PS417_07015 helicase -0.22
    5 PS417_04230 lipoprotein -0.22
    6 PS417_15255 serine/threonine protein kinase -0.22
    7 PS417_26645 chemotaxis protein -0.21
    8 PS417_26650 histidine kinase -0.20
    9 PS417_12475 hypothetical protein -0.20
    10 PS417_26655 chemotaxis protein -0.20
    11 PS417_13370 short-chain dehydrogenase -0.20
    12 PS417_11900 conjugal transfer protein TraR -0.20
    13 PS417_16740 membrane protein -0.20
    14 PS417_10205 hypothetical protein -0.20
    15 PS417_23150 Cro/Cl family transcriptional regulator -0.20
    16 PS417_19220 hypothetical protein -0.20
    17 PS417_15260 protein phosphatase -0.19
    18 PS417_19400 amino acid transporter LysE -0.19
    19 PS417_03540 type III secretion protein -0.19
    20 PS417_05120 RNA polymerase subunit sigma-24 -0.19

    Or look for positive cofitness