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  • Negative cofitness for GFF2252 from Variovorax sp. SCN45

    RNA-2',3'-PO4:RNA-5'-OH ligase
    SEED: Protein RtcB
    KEGG: protein RtcB

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6899 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) -0.55
    2 GFF6946 Sensory box histidine kinase/response regulator -0.54
    3 GFF1455 DNA polymerase II (EC 2.7.7.7) -0.50
    4 GFF3662 hypothetical protein -0.50
    5 GFF6898 hypothetical protein -0.47
    6 GFF3308 Inner membrane protein CreD -0.47
    7 GFF957 Aminobutyraldehyde dehydrogenase (EC 1.2.1.19) -0.46
    8 GFF5021 Tripartite tricarboxylate transporter TctA family -0.45
    9 GFF5711 hypothetical protein -0.45
    10 GFF5956 FIG01055484: hypothetical protein -0.44
    11 GFF5525 FIG00933173: hypothetical protein -0.44
    12 GFF6398 SH3, type 3 -0.44
    13 GFF1640 Polyketide synthase modules and related proteins -0.44
    14 GFF246 Transmembrane protein Msl3831 -0.43
    15 GFF2691 no description -0.43
    16 GFF2332 Transcriptional regulator, LysR family -0.43
    17 GFF6279 hypothetical protein -0.43
    18 GFF4241 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) -0.43
    19 GFF1026 Probable chromate transporter protein -0.43
    20 GFF5467 Hydroxymethylpyrimidine ABC transporter, substrate-binding component -0.43

    Or look for positive cofitness