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  • Negative cofitness for GFF2229 from Variovorax sp. SCN45

    Pca regulon regulatory protein PcaR
    SEED: Pca regulon regulatory protein PcaR
    KEGG: IclR family transcriptional regulator, pca regulon regulatory protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6319 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) -0.61
    2 GFF4393 Uncharacterized ABC1 family protein XCC_1720 -0.61
    3 GFF3730 Integral membrane protein -0.58
    4 GFF803 MutT/Nudix family protein -0.58
    5 GFF5969 Transcriptional regulator, GntR family -0.57
    6 GFF6693 Two-component transcriptional response regulator, LuxR family -0.56
    7 GFF5709 no description -0.56
    8 GFF1234 Peptide-methionine (S)-S-oxide reductase MsrA (EC 1.8.4.11) -0.56
    9 GFF2649 putative autotransporter protein -0.56
    10 GFF6585 D-glycerate 2-kinase (EC 2.7.1.165) -0.55
    11 GFF3667 Uncharacterized MFS-type transporter -0.55
    12 GFF7117 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) -0.55
    13 GFF72 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) -0.55
    14 GFF5995 LysR family transcriptional regulator STM3121 -0.54
    15 GFF2313 Two-component system sensor histidine kinase -0.53
    16 GFF3788 putative secreted protein -0.53
    17 GFF2504 Cell division protein ZapD -0.53
    18 GFF6813 no description -0.52
    19 GFF183 Virulence protein -0.52
    20 GFF4252 hypothetical protein -0.52

    Or look for positive cofitness