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  • Negative cofitness for PS417_11245 from Pseudomonas simiae WCS417

    RNA polymerase subunit sigma-24
    SEED: Extracytoplasmic function (ECF) sigma factor VreI
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_28430 alpha-2-macroglobulin -0.25
    2 PS417_22230 class I peptide chain release factor -0.24
    3 PS417_15710 nitrate reductase -0.24
    4 PS417_13940 racemase -0.23
    5 PS417_04130 AraC family transcriptional regulator -0.23
    6 PS417_21040 sulfurylase -0.22
    7 PS417_18945 endoribonuclease -0.22
    8 PS417_21285 hypothetical protein -0.22
    9 PS417_19145 membrane protein -0.22
    10 PS417_26915 GTPase SAR1 -0.21
    11 PS417_16070 TonB-dependent receptor -0.21
    12 PS417_00620 GntR family transcriptional regulator -0.21
    13 PS417_06970 LysR family transcriptional regulator -0.21
    14 PS417_13425 cupin -0.21
    15 PS417_20390 hypothetical protein -0.20
    16 PS417_06140 cold-shock protein -0.20
    17 PS417_13885 chemotaxis protein CheY -0.20
    18 PS417_16735 aldehyde dehydrogenase -0.19
    19 PS417_12610 RNA polymerase sigma factor -0.19
    20 PS417_15695 molybdenum cofactor biosynthesis protein A -0.19

    Or look for positive cofitness