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  • Negative cofitness for GFF2200 from Variovorax sp. SCN45

    sigma-54-dependent transcriptional regulator
    SEED: Sigma-54 dependent transcriptional regulator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3182 Cyclopropane-fatty-acyl-phospholipid synthase-like protein, clusters with FIG005069 -0.58
    2 GFF3710 Lactoylglutathione lyase and related lyases -0.57
    3 GFF4192 no description -0.53
    4 GFF2186 no description -0.52
    5 GFF6926 MBL-fold metallo-hydrolase superfamily -0.52
    6 GFF173 Hexuronate utilization operon transcriptional repressor ExuR -0.49
    7 GFF7092 no description -0.49
    8 GFF3964 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) -0.49
    9 GFF363 Transcriptional regulator, Crp/Fnr family -0.49
    10 GFF6121 FIG003461: hypothetical protein -0.48
    11 GFF6264 Ribose 1,5-bisphosphate phosphokinase PhnN (EC 2.7.4.23) -0.48
    12 GFF918 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) -0.48
    13 GFF644 ABC transporter, substrate-binding protein (cluster 6, sulfate/molybdate/tungstate/phosphate) -0.48
    14 GFF3605 Esterase/lipase -0.47
    15 GFF4941 Gfa-like protein -0.47
    16 GFF1439 putative inositol monophosphatase -0.47
    17 GFF1637 Polyketide synthase modules and related proteins -0.47
    18 GFF5994 Chlorogenate esterase -0.47
    19 GFF3515 Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) -0.47
    20 GFF7113 hypothetical protein -0.47

    Or look for positive cofitness