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  • Negative cofitness for GFF2191 from Variovorax sp. SCN45

    Pca operon transcriptional activator PcaQ
    SEED: Hypothetical Protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3285 ATP-dependent Clp protease ATP-binding subunit ClpA -0.51
    2 GFF3572 Efflux ABC transporter, permease protein -0.51
    3 GFF3449 Intradiol ring-cleavage dioxygenase:Catechol dioxygenase, N-terminal -0.50
    4 GFF3936 no description -0.50
    5 GFF1975 hypothetical protein -0.49
    6 GFF4546 Permease of the drug/metabolite transporter (DMT) superfamily -0.49
    7 GFF1093 Phosphate ABC transporter, permease protein PstC (TC 3.A.1.7.1) -0.48
    8 GFF6069 Permease of the drug/metabolite transporter (DMT) superfamily -0.48
    9 GFF2181 no description -0.48
    10 GFF2589 no description -0.47
    11 GFF6859 Two-component transcriptional response regulator, OmpR family -0.46
    12 GFF2521 FIG00931781: hypothetical protein -0.46
    13 GFF3876 UTP pyrophosphatase (EC 3.6.1.9) -0.46
    14 GFF2022 Acyl-CoA dehydrogenase -0.45
    15 GFF4766 identified by similarity to GB:AAK22812.1; match to protein family HMM PF06676 -0.45
    16 GFF2360 GGDEF domain protein -0.45
    17 GFF1488 Tetrapartite efflux system, membrane fusion component FusE-like -0.44
    18 GFF30 Murein endolytic transglycosylase MltG -0.44
    19 GFF1177 Serine protease -0.44
    20 GFF6395 hypothetical protein -0.44

    Or look for positive cofitness