• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PS417_11130 from Pseudomonas simiae WCS417

    peptide ABC transporter substrate-binding protein
    SEED: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system substrate-binding protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_16885 hypothetical protein -0.20
    2 PS417_05870 RNA-binding protein S4 -0.19
    3 PS417_06150 SAM-dependent methlyltransferase -0.18
    4 PS417_05935 polyamine ABC transporter ATP-binding protein -0.18
    5 PS417_23660 Catechol 1,2-dioxygenase (EC 1.13.11.1) (from data) -0.16
    6 PS417_13415 AraC family transcriptional regulator -0.16
    7 PS417_25055 transposase -0.16
    8 PS417_22020 pili assembly chaperone -0.16
    9 PS417_07690 hypothetical protein -0.16
    10 PS417_06430 acyl-homoserine lactone acylase subunit beta -0.16
    11 PS417_10550 DNA topoisomerase III -0.16
    12 PS417_24605 thiamine-phosphate pyrophosphorylase -0.15
    13 PS417_17820 hypothetical protein -0.15
    14 PS417_05045 acetamidase -0.15
    15 PS417_13940 racemase -0.15
    16 PS417_27475 membrane protein -0.15
    17 PS417_13750 ompetence-damaged protein -0.15
    18 PS417_11185 dimethylallyltransferase -0.15
    19 PS417_25070 hypothetical protein -0.15
    20 PS417_12475 hypothetical protein -0.14

    Or look for positive cofitness