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  • Negative cofitness for PS417_01100 from Pseudomonas simiae WCS417

    amino acid ABC transporter permease
    SEED: Cystine ABC transporter, permease protein
    KEGG: cystine transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_06880 RNA polymerase sigma factor -0.21
    2 PS417_16085 LysR family transcriptional regulator -0.20
    3 PS417_14110 2-nitropropane dioxygenase -0.19
    4 PS417_03370 porin -0.18
    5 PS417_12915 DNA-binding protein -0.18
    6 PS417_09130 dipeptidase -0.17
    7 PS417_20890 Xanthine dehydrogenase (EC 1.17.1.4) (from data) -0.17
    8 PS417_27240 hypothetical protein -0.17
    9 PS417_14710 isochorismatase -0.17
    10 PS417_18185 5-carboxymethyl-2-hydroxymuconate isomerase -0.16
    11 PS417_00830 hypothetical protein -0.16
    12 PS417_12130 ketodeoxygluconokinase -0.16
    13 PS417_19415 allantoinase -0.16
    14 PS417_03810 hypothetical protein -0.16
    15 PS417_20880 GntR family transcriptional regulator -0.15
    16 PS417_19360 hypothetical protein -0.15
    17 PS417_16125 AraC family transcriptional regulator -0.15
    18 PS417_20895 molybdenum cofactor sulfurylase -0.15
    19 PS417_07920 hypothetical protein -0.15
    20 PS417_00835 hypothetical protein -0.15

    Or look for positive cofitness