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  • Negative cofitness for GFF217 from Variovorax sp. SCN45

    Orf21; putative lipoprotein
    SEED: Orf21; putative lipoprotein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3983 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.53
    2 GFF7231 no description -0.53
    3 GFF1687 BUG/TctC family periplasmic protein -0.50
    4 GFF5765 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) -0.50
    5 GFF5165 Transcriptional regulator, LysR family -0.50
    6 GFF1486 Tetrapartite efflux system, inner membrane component FusBC-like -0.48
    7 GFF2899 no description -0.47
    8 GFF4791 RNA polymerase ECF-type sigma factor -0.47
    9 GFF6550 4'-phosphopantetheinyl transferase (EC 2.7.8.-) -0.46
    10 GFF6243 Ku domain protein -0.46
    11 GFF1749 Cystathionine beta-lyase (EC 4.4.1.8) -0.46
    12 GFF499 hypothetical protein -0.45
    13 GFF850 Two-component transcriptional response regulator, LuxR family -0.45
    14 GFF6820 hypothetical protein -0.44
    15 GFF5769 Chemotaxis response - phosphatase CheZ -0.44
    16 GFF5789 YciO protein, TsaC/YrdC paralog -0.43
    17 GFF253 Transcriptional regulator, LysR family -0.43
    18 GFF1718 Malate dehydrogenase (EC 1.1.1.37) -0.43
    19 GFF2413 hypothetical protein -0.43
    20 GFF4565 GGDEF domain protein -0.43

    Or look for positive cofitness