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  • Negative cofitness for PS417_11025 from Pseudomonas simiae WCS417

    sugar ABC transporter substrate-binding protein
    SEED: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
    KEGG: L-arabinose transport system substrate-binding protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_17690 amidase -0.23
    2 PS417_12830 LysR family transcriptional regulator -0.22
    3 PS417_28535 TonB-dependent receptor -0.21
    4 PS417_16065 3-phytase -0.20
    5 PS417_27475 membrane protein -0.20
    6 PS417_24030 MFS transporter -0.20
    7 PS417_14970 MFS transporter -0.19
    8 PS417_17045 hypothetical protein -0.19
    9 PS417_08020 LysR family transcriptional regulator -0.19
    10 PS417_04995 glutathione S-transferase -0.18
    11 PS417_22230 class I peptide chain release factor -0.18
    12 PS417_16360 histidine kinase -0.18
    13 PS417_15040 DNA-binding protein -0.18
    14 PS417_06365 RNA polymerase sigma factor -0.18
    15 PS417_05105 membrane protein -0.17
    16 PS417_09050 transcriptional regulator -0.17
    17 PS417_14080 hypothetical protein -0.17
    18 PS417_27355 sn-glycerol-3-phosphate transporter -0.17
    19 PS417_26565 LysR family transcriptional regulator -0.17
    20 PS417_21055 threonyl-tRNA synthetase -0.16

    Or look for positive cofitness