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  • Negative cofitness for GFF2157 from Variovorax sp. SCN45

    UPF0301 protein YqgE
    SEED: UPF0301 protein YqgE
    KEGG: putative transcriptional regulator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF942 Iron-sulfur cluster-binding protein -0.64
    2 GFF4063 Cytochrome c family protein -0.55
    3 GFF2904 hypothetical protein -0.53
    4 GFF1658 Transcriptional regulator, LysR family -0.49
    5 GFF6114 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) -0.49
    6 GFF4232 no description -0.47
    7 GFF1115 Putative transmembrane protein -0.46
    8 GFF365 Acyl-CoA dehydrogenase -0.46
    9 GFF6277 YecA-like protein -0.45
    10 GFF1479 Aldehyde dehydrogenase (EC 1.2.1.3) -0.45
    11 GFF6699 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) -0.45
    12 GFF7112 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) -0.44
    13 GFF6899 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) -0.44
    14 GFF869 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) -0.44
    15 GFF3189 hypothetical protein -0.44
    16 GFF4988 Gentisate 1,2-dioxygenase (EC 1.13.11.4) -0.44
    17 GFF2293 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) -0.44
    18 GFF6831 hypothetical protein -0.43
    19 GFF627 Secretion protein HlyD -0.43
    20 GFF4099 Ser/Thr protein phosphatase family protein -0.43

    Or look for positive cofitness