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  • Negative cofitness for PS417_11000 from Pseudomonas simiae WCS417

    L-arabonate dehydratase (EC 4.2.1.25) (from data)
    Original annotation: dihydroxy-acid dehydratase
    SEED: L-arabonate dehydratase (EC 4.2.1.25)
    KEGG: dihydroxy-acid dehydratase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_18870 hypothetical protein -0.23
    2 PS417_10995 GntR family transcriptional regulator -0.23
    3 PS417_06365 RNA polymerase sigma factor -0.21
    4 PS417_24605 thiamine-phosphate pyrophosphorylase -0.21
    5 PS417_12610 RNA polymerase sigma factor -0.20
    6 PS417_06635 ferredoxin -0.19
    7 PS417_00620 GntR family transcriptional regulator -0.19
    8 PS417_04995 glutathione S-transferase -0.19
    9 PS417_15565 transketolase -0.19
    10 PS417_20955 secretion protein -0.19
    11 PS417_21050 serine acetyltransferase -0.18
    12 PS417_09625 sugar ABC transporter substrate-binding protein -0.18
    13 PS417_17515 GfdT protein -0.18
    14 PS417_13425 cupin -0.17
    15 PS417_01020 glutamine ABC transporter permease -0.17
    16 PS417_23415 AraC family transcriptional regulator -0.17
    17 PS417_27605 hypothetical protein -0.17
    18 PS417_05330 fimbrial assembly protein -0.16
    19 PS417_20425 hypothetical protein -0.16
    20 PS417_09050 transcriptional regulator -0.16

    Or look for positive cofitness