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  • Negative cofitness for GFF2152 from Variovorax sp. SCN45

    twitching motility protein PilH
    SEED: twitching motility protein PilH
    KEGG: twitching motility two-component system response regulator PilH

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4485 FIG00715336: hypothetical protein -0.73
    2 GFF3068 FIG00538108: hypothetical protein -0.72
    3 GFF5322 Type IV pilus biogenesis protein PilP -0.72
    4 GFF5323 Type IV pilus biogenesis protein PilQ -0.71
    5 GFF2379 Serine/threonine protein kinase -0.71
    6 GFF5417 hypothetical protein -0.71
    7 GFF5321 Type IV pilus biogenesis protein PilO -0.71
    8 GFF5319 Type IV pilus biogenesis protein PilM -0.71
    9 GFF2509 Type IV fimbrial assembly protein PilC -0.71
    10 GFF993 Type IV pilus biogenesis protein PilF -0.71
    11 GFF5418 Type IV fimbrial biogenesis protein PilY1 -0.71
    12 GFF5419 Type IV pilus biogenesis protein PilE -0.71
    13 GFF5871 hypothetical protein -0.70
    14 GFF5490 Uncharacterized protein with LysM domain, COG1652 -0.70
    15 GFF5414 hypothetical protein -0.70
    16 GFF5320 Type IV pilus biogenesis protein PilN -0.70
    17 GFF5415 Type IV fimbrial biogenesis protein PilV -0.70
    18 GFF5416 Type IV fimbrial biogenesis protein PilW -0.70
    19 GFF33 Type IV pilus biogenesis protein PilZ -0.69
    20 GFF2519 FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) -0.68

    Or look for positive cofitness