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  • Negative cofitness for GFF2147 from Sphingobium sp. HT1-2

    Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
    SEED: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
    KEGG: 2-oxoisovalerate dehydrogenase E1 component, beta subunit

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3594 Histidine kinase -0.81
    2 GFF1570 putative phospholipid N-methyltransferase -0.78
    3 GFF2494 TspO and MBR like proteins -0.77
    4 GFF4166 Ribosome hibernation promoting factor Hpf -0.77
    5 GFF1996 hypothetical protein -0.75
    6 GFF853 hypothetical protein -0.73
    7 GFF366 NADH:ubiquinone oxidoreductase 17.2 kD subunit -0.73
    8 GFF1092 conserved hypothetical protein, similar to SMa10599 -0.73
    9 GFF3578 hypothetical protein -0.73
    10 GFF1745 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) -0.72
    11 GFF3172 Exopolyphosphatase (EC 3.6.1.11) -0.71
    12 GFF3047 Two-component oxygen-sensor histidine kinase FixL -0.70
    13 GFF472 Chaperone protein DnaJ -0.70
    14 GFF2832 Maltodextrin glucosidase (EC 3.2.1.20) -0.70
    15 GFF3724 Glucans biosynthesis protein D precursor -0.69
    16 GFF1186 Nitrate ABC transporter, substrate-binding protein -0.69
    17 GFF1263 Endo-1,4-beta-xylanase (EC 3.2.1.8) -0.69
    18 GFF1787 FOG: TPR repeat, SEL1 subfamily -0.69
    19 GFF5325 RNA polymerase ECF-type sigma factor -0.68
    20 GFF1756 hypothetical protein -0.68

    Or look for positive cofitness