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  • Negative cofitness for PS417_10890 from Pseudomonas simiae WCS417

    Deoxyribose 1-dehydrogenase, alpha subunit (from data)
    Original annotation: (2Fe-2S)-binding protein
    SEED: Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16)
    KEGG: isoquinoline 1-oxidoreductase, alpha subunit

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_10900 ABC transporter substrate-binding protein -0.31
    2 PS417_26760 oxidase -0.23
    3 PS417_03560 GTP-binding protein -0.22
    4 PS417_10905 hypothetical protein -0.21
    5 PS417_06480 hypothetical protein -0.18
    6 PS417_00295 hypothetical protein -0.17
    7 PS417_04860 ATPase -0.17
    8 PS417_10895 AMP-dependent synthetase -0.17
    9 PS417_10150 tail protein -0.17
    10 PS417_03145 acetyl-CoA acetyltransferase -0.17
    11 PS417_03215 8-oxoguanine deaminase -0.17
    12 PS417_07315 LysR family transcriptional regulator -0.16
    13 PS417_05220 tRNA methyltransferase -0.15
    14 PS417_04050 peptide ABC transporter ATP-binding protein -0.15
    15 PS417_03950 hypothetical protein -0.15
    16 PS417_10915 ornithine cyclodeaminase -0.15
    17 PS417_10240 hypothetical protein -0.15
    18 PS417_08830 membrane protein -0.15
    19 PS417_20930 50S rRNA methyltransferase -0.14
    20 PS417_05225 tRNA methyltransferase -0.14

    Or look for positive cofitness