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  • Negative cofitness for PS417_10885 from Pseudomonas simiae WCS417

    Deoxyribose 1-dehydrogenase, beta subunit (from data)
    Original annotation: isoquinoline 1-oxidoreductase
    SEED: Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16)
    KEGG: isoquinoline 1-oxidoreductase, beta subunit

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_10900 ABC transporter substrate-binding protein -0.32
    2 PS417_10905 hypothetical protein -0.28
    3 PS417_03560 GTP-binding protein -0.25
    4 PS417_03215 8-oxoguanine deaminase -0.25
    5 PS417_26760 oxidase -0.24
    6 PS417_10895 AMP-dependent synthetase -0.20
    7 PS417_03145 acetyl-CoA acetyltransferase -0.19
    8 PS417_03485 type III secretion protein -0.17
    9 PS417_25685 zinc-binding protein -0.16
    10 PS417_12845 NAD(P)H dehydrogenase -0.16
    11 PS417_03140 3-ketoacyl-ACP reductase -0.16
    12 PS417_17715 actin -0.16
    13 PS417_06205 methionine aminopeptidase -0.15
    14 PS417_12655 methionine aminopeptidase -0.15
    15 PS417_05220 tRNA methyltransferase -0.15
    16 PS417_11670 multidrug transporter MATE -0.15
    17 PS417_06480 hypothetical protein -0.14
    18 PS417_23525 glycoside hydrolase -0.14
    19 PS417_09845 hypothetical protein -0.14
    20 PS417_14050 recombinase -0.14

    Or look for positive cofitness