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  • Negative cofitness for GFF2117 from Variovorax sp. SCN45

    KEGG: type IV fimbrial biogenesis protein FimT

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6743 no description -0.61
    2 GFF2684 Enoyl-CoA hydratase (EC 4.2.1.17) -0.60
    3 GFF815 COGs COG3777 -0.60
    4 GFF1986 Oxidoreductase, short-chain dehydrogenase/reductase family -0.60
    5 GFF5185 FIG00732904: hypothetical protein -0.59
    6 GFF5848 Flagellar motor protein -0.59
    7 GFF2778 Fosmidomycin resistance protein -0.58
    8 GFF7410 no description -0.57
    9 GFF5401 2-keto-3-deoxy-L-fuconate dehydrogenase -0.57
    10 GFF251 hypothetical protein -0.57
    11 GFF4726 hypothetical protein -0.57
    12 GFF5872 Inner membrane protein YbhQ -0.56
    13 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) -0.55
    14 GFF327 5'-methylthioadenosine nucleosidase (EC 3.2.2.16) @ S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) -0.54
    15 GFF4766 identified by similarity to GB:AAK22812.1; match to protein family HMM PF06676 -0.54
    16 GFF6498 FIG00348192: hypothetical protein -0.54
    17 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily -0.54
    18 GFF4704 Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-) -0.53
    19 GFF7097 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) -0.53
    20 GFF5356 Aldose 1-epimerase -0.53

    Or look for positive cofitness