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  • Negative cofitness for GFF2070 from Sphingobium sp. HT1-2

    Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO (EC 2.1.1.74)
    SEED: tRNA:m(5)U-54 MTase gid
    KEGG: glucose inhibited division protein Gid

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3948 Xaa-Pro dipeptidase (EC 3.4.13.9) -0.73
    2 GFF4508 hypothetical protein -0.68
    3 GFF790 hypothetical protein -0.67
    4 GFF5021 hypothetical protein -0.64
    5 GFF106 mRNA 3-end processing factor -0.63
    6 GFF4987 conserved hypothetical protein -0.63
    7 GFF1690 Two-component system sensor histidine kinase -0.63
    8 GFF1454 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) -0.63
    9 GFF3655 hypothetical protein -0.62
    10 GFF930 Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) -0.60
    11 GFF4218 hypothetical protein -0.58
    12 GFF4754 Mobile element protein -0.57
    13 GFF63 hypothetical protein -0.57
    14 GFF795 RcnR-like protein clustered with cobalt-zinc-cadmium resistance protein CzcD -0.57
    15 GFF4513 hypothetical protein -0.56
    16 GFF3195 Prolyl endopeptidase (EC 3.4.21.26) -0.55
    17 GFF4383 hypothetical protein -0.54
    18 GFF4251 hypothetical protein -0.54
    19 GFF1022 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE -0.53
    20 GFF2890 PKHD-type hydroxylase YbiX -0.53

    Or look for positive cofitness