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  • Negative cofitness for GFF2057 from Variovorax sp. SCN45

    23S rRNA (adenine(2030)-N(6))-methyltransferase (EC 2.1.1.266)
    SEED: Protein involved in catabolism of external DNA

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2964 L-carnitine dehydratase/bile acid-inducible protein F -0.59
    2 GFF647 Two-component system response regulator QseB -0.59
    3 GFF124 Beta-ureidopropionase (EC 3.5.1.6) -0.59
    4 GFF6010 MmgE/PrpD family protein -0.55
    5 GFF4508 no description -0.54
    6 GFF6814 NADH dehydrogenase (EC 1.6.99.3) -0.53
    7 GFF3232 Phage lysozyme R (EC 3.2.1.17) -0.52
    8 GFF5631 DNA-binding domain of ModE -0.52
    9 GFF6995 Flagellar M-ring protein FliF -0.52
    10 GFF6159 carbon monoxide dehydrogenase G protein -0.52
    11 GFF7258 Transcriptional regulator, IclR family -0.51
    12 GFF4329 Enoyl-CoA hydratase (EC 4.2.1.17) -0.51
    13 GFF7382 hypothetical protein AF1210 -0.51
    14 GFF2713 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily -0.51
    15 GFF5017 Translation initiation factor SUI1-related protein -0.50
    16 GFF5968 no description -0.50
    17 GFF1603 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) -0.49
    18 GFF5893 Low-specificity L-threonine aldolase (EC 4.1.2.48) -0.49
    19 GFF1919 Rhodanese-related sulfurtransferase, 4 domains -0.49
    20 GFF3954 Similar to cobalamin biosynthesis protein CbiB -0.48

    Or look for positive cofitness