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  • Negative cofitness for GFF2047 from Variovorax sp. SCN45

    Polyhydroxyalkanoic acid synthase
    SEED: Polyhydroxyalkanoic acid synthase
    KEGG: polyhydroxyalkanoate synthase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) -0.75
    2 GFF7333 Transcriptional regulator, MerR family -0.60
    3 GFF1352 Probable glutathione s-transferase protein (EC 2.5.1.18) -0.59
    4 GFF2208 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily -0.57
    5 GFF6792 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) -0.54
    6 GFF3852 Tetrapyrrole methylase family protein -0.54
    7 GFF185 hypothetical protein -0.52
    8 GFF5033 ABC-type spermidine/putrescine transport system, permease component II -0.52
    9 GFF3386 hypothetical protein -0.50
    10 GFF522 RND efflux system, inner membrane transporter -0.50
    11 GFF6216 hypothetical protein -0.50
    12 GFF7248 no description -0.50
    13 GFF3814 OpgC protein -0.50
    14 GFF809 Acetyl-CoA acetyltransferase (EC 2.3.1.9) -0.49
    15 GFF4068 Heavy metal sensor histidine kinase -0.49
    16 GFF6488 no description -0.49
    17 GFF5153 Putative ROK-family transcriptional regulator -0.49
    18 GFF4857 benzoate MFS transporter BenK -0.48
    19 GFF5687 FIG01027591: hypothetical protein -0.48
    20 GFF5177 hypothetical protein -0.48

    Or look for positive cofitness