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  • Negative cofitness for GFF2039 from Sphingobium sp. HT1-2

    RNA polymerase ECF-type sigma factor
    SEED: RNA polymerase, sigma-24 subunit, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3970 hypothetical protein -0.77
    2 GFF2082 hypothetical protein -0.76
    3 GFF1967 beta-N-acetylglucosaminidase (EC 3.2.1.52) -0.75
    4 GFF99 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) -0.74
    5 GFF655 hypothetical protein -0.73
    6 GFF2163 hypothetical protein -0.72
    7 GFF2565 Ferredoxin reductase -0.72
    8 GFF256 hypothetical protein -0.71
    9 GFF455 putative dioxygenase ferredoxin subunit -0.71
    10 GFF1127 hypothetical protein -0.69
    11 GFF3173 hypothetical protein -0.69
    12 GFF2725 alpha-L-arabinofuranosidase (EC 3.2.1.55) -0.69
    13 GFF3625 Peroxiredoxin -0.69
    14 GFF2019 hypothetical protein -0.69
    15 GFF2403 hypothetical protein -0.68
    16 GFF4569 OmpA/MotB -0.68
    17 GFF2925 hypothetical protein -0.68
    18 GFF1977 Type IV prepilin peptidase TadV/CpaA -0.68
    19 GFF675 hypothetical protein -0.68
    20 GFF400 Possible NADH oxidoreductase -0.68

    Or look for positive cofitness