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  • Negative cofitness for GFF2018 from Variovorax sp. SCN45

    Transcriptional regulator, IclR family
    SEED: Transcriptional regulator, IclR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6276 Uncharacterized MFS-type transporter -0.59
    2 GFF1027 Ribonuclease BN -0.54
    3 GFF3921 Tryptophan 2,3-dioxygenase (EC 1.13.11.11) -0.53
    4 GFF6677 regulatory protein -0.51
    5 GFF5093 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60) -0.51
    6 GFF7369 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) -0.50
    7 GFF1117 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) -0.48
    8 GFF248 Cell division protein FtsH (EC 3.4.24.-) -0.48
    9 GFF3863 RNA polymerase sigma factor RpoE -0.48
    10 GFF1125 Superoxide dismutase [Mn] (EC 1.15.1.1) -0.47
    11 GFF3836 Cyclic beta-1,2-glucan synthase (EC 2.4.1.-) -0.47
    12 GFF921 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) -0.47
    13 GFF5387 Two-component system histidine kinase BP2548 -0.46
    14 GFF1008 Glyoxalase family protein -0.46
    15 GFF6845 ATPase involved in DNA repair -0.46
    16 GFF517 no description -0.45
    17 GFF1313 Cellulose synthase operon protein C -0.45
    18 GFF4647 no description -0.45
    19 GFF2752 FIG00974677: hypothetical protein -0.45
    20 GFF6808 Peroxiredoxin OsmC (EC 1.11.1.15) -0.45

    Or look for positive cofitness