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  • Negative cofitness for GFF2017 from Variovorax sp. SCN45

    D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
    SEED: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
    KEGG: gyoxylate/hydroxypyruvate reductase A

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1263 Serine acetyltransferase (EC 2.3.1.30) -0.59
    2 GFF5935 VgrG protein -0.58
    3 GFF5999 DNA polymerase IV (EC 2.7.7.7) -0.54
    4 GFF3472 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) -0.54
    5 GFF1982 no description -0.53
    6 GFF275 FIG00349534: hypothetical protein -0.52
    7 GFF871 Vitamin B12 ABC transporter, substrate-binding protein BtuF -0.49
    8 GFF436 LrgA-associated membrane protein LrgB -0.48
    9 GFF5270 BUG/TctC family periplasmic protein -0.48
    10 GFF2432 Fe2+-dicitrate sensor, membrane component -0.47
    11 GFF5340 Efflux ABC transporter, ATP-binding protein -0.47
    12 GFF6569 no description -0.47
    13 GFF4573 L-carnitine dehydratase/bile acid-inducible protein F -0.46
    14 GFF5229 Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3) -0.46
    15 GFF4999 hypothetical protein -0.45
    16 GFF6469 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter -0.45
    17 GFF3438 Amidohydrolase family protein -0.45
    18 GFF2875 Granule-associated protein -0.45
    19 GFF2639 Ferrichrome-iron receptor -0.45
    20 GFF877 putative membrane protein -0.45

    Or look for positive cofitness